Overview¶
A Module is a useful biochemical formulation, often incorporating a genetically encoded component, that performs a particular function. Modules Specifications answer the questions 1) “What is it?” and 2) “What should I expect when I implement it?”.
Nucleus Cytosol¶
Modules validated in Nucleus Cytosol.
| Module Class | Specification | DevNotes |
|---|---|---|
| Cytosol (Base) | Cytosol | 10 |
| Protein Mix | PMix | 0 |
| Small Molecule Mix | SMix | 0 |
| Membrane (Base) | POPC/Chol | 4 |
| Reporter | deGFP | 7 |
| Cell (Base) | Base Cell | 6 |
| Cell (Dye) | Dye Liposomes | 0 |
| Detector | pH-Sensing | 1 |
| Reporter | LacZ Enzyme | 6 |
| Cell (Sensing) | pH Sensing Cell | 1 |
| Cell (Substrate) | Substrate LUV: CPRG | 3 |
| Cell (Substrate) | Substrate SUV: CPRG | 1 |
| Cascade | pH Cascade | 1 |
| Reporter | Color Change | 6 |
| Detector | 3OC6-HSL (EsaR) | 1 |
Gels¶
Modules that hold a sample in a polymer network set in an outer solution.
| Module Class | Specification | DevNotes |
|---|---|---|
| Gel (Thermal) | Gel: ULGA | 2 |
| Gel (Thermal) | Gel: LGA | 2 |
| Gel (Photopatterned) | Gel: PEG-nb | 2 |
PURExpress¶
Modules validated in NEB PURExpress.
Contributing a Module¶
Modules specifications are derived from DevNotes that follow the adhere to the Module Contribution Guidelines.